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Eurogenes new Jtest admixture proportions, gives your Jewish Ashkenazi score
Topic Started: Oct 11 2012, 01:33 AM (2,407 Views)
Delilah
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DELILAH
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Mine

Jtest Admixture Proportions

This utility uses the Eurogenes Jtest model, created by Davidski (Polako). Questions and comments about this model
should be directed to him at his Eurogenes Ashkenazi blog.

Admix Results (sorted):

# Population Percent
1 ATLANTIC 18.27
2 NORTH-CENTRAL_EURO 17.09
3 WEST_MED 16.2
4 EAST_MED 9.17
5 EAST_EURO 8.33
6 MIDDLE_EASTERN 6.08
7 WEST_AFRICAN 5.49
8 SIBERIAN 5
9 ASHKENAZIM 4.17
10 SOUTH_BALTIC 3.72
11 EAST_AFRICAN 2.57
12 EAST_ASIAN 2.04
13 WEST_ASIAN 1.71
14 SOUTH_ASIAN 0.16





It gives your Ashkenazi Jewish score. Too bad it doesn't do Sephardi Jewish.

Amanda and JewFist and 7eleven might be interested. It's on gedmatch.com.

My Taino element is more Siberian than East Asian for sure. 5% Siberian and only 2% East Asian. 7% Mongoloid.

First time I get East African in one of these calculators.
I copied this from Polako's blog.

Based on a few test runs today, I’d say that the noise level for the continental clusters is much less than 1%. But it rises to a few per cent for the intra-West Eurasian clusters. In other words, if you’re European, then you might score something like 0.02% in the Sub-Saharan cluster, which basically means 0%. However, you might get around 2% in the Middle Eastern cluster, even though you’re from Central Europe, and you don’t have any recent Middle Eastern ancestry. You can blame various prehistoric and historic migrations into Europe for these seemingly quirky results, and also the fact that Mesolithic Europeans were significantly Eurasian (i.e. Siberian, Amerindian and South Asian-like).

The Ashkenazim cluster is very similar to the Middle Eastern cluster in that regard. So anyone who gets an Ashkenazim score of around 2-3% either has very distant Jewish ancestry or, more likely, none at all. However, those who show more than 25% membership in that cluster are almost certainly of fully Ashkenazim ancestry, and their genomes peppered with Ashkenazim-specific chromosomal segments.

Wow, there’s really not much difference between 2% and 25%, you might say. In fact, there is if we say there is. As always, the main thing to remember is that these clusters don’t really exist, because genetic variation is clinal, so the cluster names are basically arbitrary and it’s always the relative results that matter. That’s why to really understand what your scores mean, you need to compare them with those of other users.

Obviously, it's best to compare with people from the same ethnic and/or regional groups. If the Ashkenazim + East Med scores look relatively inflated, that's a sign of recent Ashkenazim ancestry.

Feel free to use the files above for anything you want, except commercial stuff. Please note, I make no guarantees that they’ll provide accurate results for everyone. I might update this post early next week with new and/or additional files and more tips.

...

Update 6/10/2012: The Jtest K14 and EUtest K13 will soon be available at GEDmatch, accompanied by an "Oracle" population matching analysis and maybe even a 3D genetic map. If all goes to plan, the population matching test should be able to give a decisive yay or nay to anyone wondering whether they have recent Ashkenazim ancestry.

By the way, below is a PCA plot made from the Jtest population averages. It was produced by one of my project members so that we could check the reliability of the 14 "ancestral" components. The samples were classified into clusters based on their highest peaking component. So, for instance, the Scots are in the light blue Atlantic cluster, along with French Basques, because the Atlantic component dominates in both groups. However, overall, they're more similar to other samples than to each other.

As per above, the plan is that GEDmatch will soon offer a 3D genetic map based on the loadings from this PCA analysis.


Edited by Delilah, Oct 11 2012, 04:57 AM.
"Let nothing disturb you. Let nothing frighten you. All things pass. God does not change. Patience achieves everything. Whoever has God lacks nothing. God alone suffices." St. Teresa of Avila
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Alberta
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Hey Del where do you find this info I would to know mine ?
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jpg upload
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Delilah
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It's here: gedmatch.com/

Scroll down to Admixture Proportions
"Let nothing disturb you. Let nothing frighten you. All things pass. God does not change. Patience achieves everything. Whoever has God lacks nothing. God alone suffices." St. Teresa of Avila
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Pallantides
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Eurogenes: NO2
Dodecad: DOD197
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7eleven
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1 NORTH-CENTRAL_EURO 21.13
2 EAST_MED 15.05
3 ASHKENAZIM 14.99
4 ATLANTIC 11.67
5 WEST_MED 10.66
6 SOUTH_BALTIC 10.16
7 EAST_EURO 8.2
8 WEST_ASIAN 4.97
9 MIDDLE_EASTERN 1.41
10 EAST_AFRICAN 1.07
11 SIBERIAN 0.68
12 SOUTH_ASIAN 0.01

# Primary Population (source) Secondary Population (source) Distance
1 52.7% DE + 47.3% AJ @ 5.91
2 53.3% AJ + 46.7% South & Central Swedish @ 6.1
3 53.2% AJ + 46.8% NO @ 6.2
4 51.1% NL + 48.9% AJ @ 6.21
5 51.6% AJ + 48.4% DK @ 6.29
6 50.3% AJ + 49.7% English @ 6.59
7 54.8% AJ + 45.2% North Swedish @ 6.83
8 59.3% AT + 40.7% AJ @ 6.91
9 53.3% AJ + 46.7% Orcadian @ 7.85
10 51.4% AJ + 48.6% Cornish @ 7.88
11 54.4% AJ + 45.6% IE @ 8.21
12 55.1% AJ + 44.9% Scottish @ 8.65
13 64% Serbian + 36% AJ @ 8.67
14 55.7% AJ + 44.3% Southwest Finnish @ 8.83
15 54.4% FR + 45.6% AJ @ 8.99
16 56.2% HU + 43.8% AJ @ 9.16
17 59.7% AJ + 40.3% South Finnish @ 9.98
18 64.4% RO + 35.6% AJ @ 10.77
19 57.1% AJ + 42.9% PL @ 10.83
20 61.4% AJ + 38.6% East Finnish @ 10.86

Nazi Jew? LOL
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Delilah
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Oh I forget to include this

What is PT? And Es? Estonia maybe?

Single Population Sharing:

# Population (source) Distance
1 PT 12.54
2 ES 14.28
3 FR 15.2
4 North Italian 15.53
5 Tuscan 17.32
6 AT 18.45
7 Serbian 18.88
8 DE 19.41
9 RO 19.76
10 NL 19.81
11 Cornish 19.93
12 English 20.49
13 HU 20.89
14 Orcadian 21.89
15 IE 21.94
16 DK 22.06
17 Scottish 23
18 NO 23.51
19 South Italian & Sicilian 23.61
20 South & Central Swedish 24.14
"Let nothing disturb you. Let nothing frighten you. All things pass. God does not change. Patience achieves everything. Whoever has God lacks nothing. God alone suffices." St. Teresa of Avila
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7eleven
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ES is Spain and PT is Portugal.
Edited by 7eleven, Oct 11 2012, 02:54 AM.
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Pallantides
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EE is Estonia, ES is Spain.
Eurogenes: NO2
Dodecad: DOD197
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Delilah
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Thanks now that makes sense!

I know Espana is Spain but I thought he was abbreviating in English.
"Let nothing disturb you. Let nothing frighten you. All things pass. God does not change. Patience achieves everything. Whoever has God lacks nothing. God alone suffices." St. Teresa of Avila
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Pallantides
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Admixture by Chromosome:
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Eurogenes: NO2
Dodecad: DOD197
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7eleven
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^Its interesting that on chromosome 14 you have 15% Ashkenazi. That is my total amount of Ashkenazi and Im half Jewish, so maybe you have a Jew somewhere in your family tree.
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Lazar
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This is odd. A predominately Spaish/Portugeuse Puerto Rican is 23.5 points from the Norweigen Avg and an east Finn is 19.5 points. I would think east Finns are a lot closer to Norweigens than Puerto Ricans
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Breogan2
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My Jtest results through Gedmatch:

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"Rich Gallaecia sent its youths, wise in the knowledge of divination by the entrails of beasts, by feathers and flames, now howling barbarian songs in the tongues of their homelands, now alternately stamping the ground in their rhythmic dances until the ground rang, and accompanying the playing with sonorous shields".....Silius Italicus, Punica
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Lazar
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Would anyone be willing to run the Serbian avg?? It can be found on the final avgs V2 sheet.
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7eleven
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Lazar
Oct 11 2012, 03:25 AM
This is odd. A predominately Spaish/Portugeuse Puerto Rican is 23.5 points from the Norweigen Avg and an east Finn is 19.5 points. I would think east Finns are a lot closer to Norweigens than Puerto Ricans
Are you retarded? Ofcourse Norwegians are closer to Finns than Puerto Ricans.
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Graham
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Just ran it through. :)

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Sampr
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#PopulationPercent
1 WEST_AFRICAN 21.5
2 ATLANTIC 15.57
3 NORTH-CENTRAL_EURO 10.8
4 WEST_MED 10.32
5 EAST_AFRICAN 8.31
6 SIBERIAN 5.78
7 EAST_EURO 5.6
8 MIDDLE_EASTERN 5.31
9 WEST_ASIAN 4.45
10 ASHKENAZIM 4.23
11 SOUTH_ASIAN 2.9
12 SOUTH_BALTIC 2.03
13 EAST_ASIAN 1.97
14 EAST_MED 1.22

Single Population Sharing:

#Population (source)Distance
1 Algerian 34.46
2 Moroccan 34.99
3 PT 35.1
4 ES 36.28
5 FR 36.92
6 North Italian 37.08
7 AT 37.47
8 Serbian 37.73
9 RO 37.91
10 Tuscan 38.23
11 HU 38.24
12 DE 38.27
13 Mozabite Berber 38.42
14 NL 38.52
15 Cornish 38.53
16 English 38.99
17 IE 39.21
18 Orcadian 39.24
19 DK 39.7
20 Scottish 39.78

Mixed Mode Population Sharing:

# Primary Population (source) Secondary Population (source) Distance
1 66.8%FR + 33.2%Luhya @ 11.37
2 68.1%PT + 31.9%Luhya @ 11.72
3 67.3%ES + 32.7%Luhya @ 11.73
4 71.4%PT + 28.6%Yoruba @ 12.2
5 70.2%FR + 29.8%Yoruba @ 12.48
6 70.7%ES + 29.3%Yoruba @ 12.58
7 66%Cornish + 34%Luhya @ 12.99
8 67%North Italian + 33%Luhya @ 13.3
9 66.1%NL + 33.9%Luhya @ 13.57
10 66.3%DE + 33.7%Luhya @ 13.65
11 65.7%IE + 34.3%Luhya @ 13.69
12 65.8%English + 34.2%Luhya @ 13.81
13 66.9%AT + 33.1%Luhya @ 13.89
14 65.7%Orcadian + 34.3%Luhya @ 13.91
15 70.5%North Italian + 29.5%Yoruba @ 14.16
16 69.5%Cornish + 30.5%Yoruba @ 14.21
17 65.4%Scottish + 34.6%Luhya @ 14.29
18 69.6%NL + 30.4%Yoruba @ 14.71
19 69.8%DE + 30.2%Yoruba @ 14.72
20 70.3%AT + 29.7%Yoruba @ 14.78
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Lazar
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7eleven
Oct 11 2012, 04:11 AM
Lazar
Oct 11 2012, 03:25 AM
This is odd. A predominately Spaish/Portugeuse Puerto Rican is 23.5 points from the Norweigen Avg and an east Finn is 19.5 points. I would think east Finns are a lot closer to Norweigens than Puerto Ricans
Are you retarded? Ofcourse Norwegians are closer to Finns than Puerto Ricans.
Did you read what I wrote idiot?? Obviously Finns should be a lot closer to Norweigenes than Puerto Ricans but according to these results east finns are only slightly closer to Norweigens than Puerto Ricans that is what doesn't make sense.
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blank slate
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I ran the Jtest in Gedmatch for myself, and my parents.

Mine:

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Mom's:

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Dad's:

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Bulletproofpride
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Delilah
Oct 11 2012, 01:33 AM
First time I get East African in one of these calculators.
:D How does it feel now that you know you have some little bit of us in you?
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